3HFW Hydrolase date May 13, 2009
title Crystal Structure Of Human Adp-Ribosylhydrolase 1 (Harh1)
authors C.Mueller-Dieckmann, M.S.Weiss, J.Mueller-Dieckmann, F.Koch-Nol
compound source
Molecule: Protein Adp-Ribosylarginine Hydrolase
Chain: A
Synonym: Adp-Ribosylarginine Hydrolase, Adp-Ribose-L-Argini Cleaving Enzyme;
Ec: 3.2.2.19
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor 0.155 R_Free 0.185
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.280 52.790 140.340 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.92 Å
ligand ADP, CL, K, MG enzyme Hydrolase E.C.3.2.2.19 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (3hfw.pdb1.gz) 59 Kb
  • LPC: Ligand-Protein Contacts for 3HFW
  • CSU: Contacts of Structural Units for 3HFW
  • Structure Factors (375 Kb)
  • Retrieve 3HFW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3HFW from S2C, [Save to disk]
  • Re-refined 3hfw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3HFW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3HFW
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3HFW, from MSDmotif at EBI
  • Fold representative 3hfw from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3hfw] [3hfw_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3HFW
  • Community annotation for 3HFW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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