OCA Atlas for 3HK9

3HK9

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CL, CO3, REL, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
A, K, C, L, D, H, J, F, E, G, I, B

Primary reference

The Mechanism of the Reaction Catalyzed by Uronate Isomerase Illustrates How an Isomerase May Have Evolved from a Hydrolase within the Amidohydrolase Superfamily., Nguyen TT, Fedorov AA, Williams L, Fedorov EV, Li Y, Xu C, Almo SC, Raushel FM, Biochemistry. 2009 Aug 14. PMID:19678710

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (847 Kb) [Save to disk]

Biological Unit Coordinates (3hk9.pdb1.gz) 494 Kb

Biological Unit Coordinates (3hk9.pdb2.gz) 494 Kb

Biological Unit Coordinates (3hk9.pdb3.gz) 563 Kb

Biological Unit Coordinates (3hk9.pdb4.gz) 494 Kb

LPC: Ligand-Protein Contacts for 3HK9

CSU: Contacts of Structural Units for 3HK9

Structure Factors (3364 Kb)

Retrieve 3HK9 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3HK9 from S2C, [Save to disk]

Re-refined 3hk9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3HK9 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3hk9] [3hk9_A] [3hk9_B] [3hk9_C] [3hk9_D] [3hk9_E] [3hk9_F] [3hk9_G] [3hk9_H] [3hk9_I] [3hk9_J] [3hk9_K] [3hk9_L]

SWISS-PROT database: [Q9KFI6]

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