3HLJ Lyase date May 27, 2009
title Crystal Structure Of Human Carbonic Anhydrase Isozyme II Wit Methylthiobenzimidazo[1,2-C][1,2,3]Thiadiazol-7-Sulfonamide
authors S.Grazulis, E.Manakova, D.Golovenko
compound source
Molecule: Carbonic Anhydrase 2
Chain: A
Synonym: Carbonic Anhydrase II, Ca-II, Carbonate Dehydratas Carbonic Anhydrase C, Cac;
Ec: 4.2.1.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ca2
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 1 21 1
R_factor 0.175 R_Free 0.206
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.140 40.927 72.036 90.00 104.23 90.00
method X-Ray Diffractionresolution 1.44 Å
ligand NA, UNX, V21, ZN BindingDB enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceInhibition and binding studies of carbonic anhydrase isozymes I, II and IX with benzimidazo[1,2-c][1,2,3]thiadiazole-7-sulphonamides., Baranauskiene L, Hilvo M, Matuliene J, Golovenko D, Manakova E, Dudutiene V, Michailoviene V, Torresan J, Jachno J, Parkkila S, Maresca A, Supuran CT, Grazulis S, Matulis D, J Enzyme Inhib Med Chem. 2010 Feb 18. PMID:20166809
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (96 Kb) [Save to disk]
  • Biological Unit Coordinates (3hlj.pdb1.gz) 90 Kb
  • LPC: Ligand-Protein Contacts for 3HLJ
  • CSU: Contacts of Structural Units for 3HLJ
  • Structure Factors (848 Kb)
  • Retrieve 3HLJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3HLJ from S2C, [Save to disk]
  • Re-refined 3hlj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3HLJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3HLJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3HLJ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3hlj_A] [3hlj]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3HLJ: [Carb_anhydrase ] by SMART
  • Other resources with information on 3HLJ
  • Community annotation for 3HLJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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