3HO3 Signaling Protein date Jun 01, 2009
title Crystal Structure Of Hedgehog-Interacting Protein (Hhip)
authors I.Bosanac, S.G.Hymowitz
compound source
Molecule: Hedgehog-Interacting Protein
Chain: A
Fragment: Unp Residues 193-667
Synonym: Hhip, Hip
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hhip, Hhip Orfnames: Unq5825pro19644, Hip, Unq5825p
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111
Expression_system_cell_line: Insect Cells
Expression_system_vector_type: Gateway Vector Pentrd-Topo (Invitrogen);
Expression_system_plasmid: Pentrd-Topo With Honeybee Melit Secretion Signal
symmetry Space Group: C 2 2 21
R_factor 0.240 R_Free 0.292
crystal
cell
length a length b length c angle alpha angle beta angle gamma
86.230 118.011 126.348 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.90 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe structure of SHH in complex with HHIP reveals a recognition role for the Shh pseudo active site in signaling., Bosanac I, Maun HR, Scales SJ, Wen X, Lingel A, Bazan JF, de Sauvage FJ, Hymowitz SG, Lazarus RA, Nat Struct Mol Biol. 2009 Jul;16(7):691-7. Epub 2009 Jun 28. PMID:19561609
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk]
  • Biological Unit Coordinates (3ho3.pdb1.gz) 69 Kb
  • CSU: Contacts of Structural Units for 3HO3
  • Likely Quarternary Molecular Structure file(s) for 3HO3
  • Structure Factors (113 Kb)
  • Retrieve 3HO3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3HO3 from S2C, [Save to disk]
  • Re-refined 3ho3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3HO3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3HO3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3HO3, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ho3_A] [3ho3]
  • SWISS-PROT database: [Q96QV1]
  • Domain organization of [HHIP_HUMAN] by SWISSPFAM
  • Domain found in 3HO3: [EGF ] by SMART
  • Other resources with information on 3HO3
  • Community annotation for 3HO3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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