3HOY		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BRU, MG, ZN	enzyme
Gene Ontology	Chain Function Process Component A RNA-directed 5'-3' RNA polym... B RNA-directed 5'-3' RNA polym... C RNA-directed 5'-3' RNA polym... D RNA-directed 5'-3' RNA polym... E RNA-directed 5'-3' RNA polym... F RNA-directed 5'-3' RNA polym... G RNA-directed 5'-3' RNA polym... H RNA-directed 5'-3' RNA polym... I RNA-directed 5'-3' RNA polym... J RNA-directed 5'-3' RNA polym... DNA-directed RNA polymerase ... K RNA-directed 5'-3' RNA polym... L RNA-directed 5'-3' RNA polym...
Primary reference	Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA., Sydow JF, Brueckner F, Cheung AC, Damsma GE, Dengl S, Lehmann E, Vassylyev D, Cramer P, Mol Cell. 2009 Jun 26;34(6):710-21. PMID:19560423

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (645 Kb) [Save to disk] Biological Unit Coordinates (3hoy.pdb1.gz) 634 Kb LPC: Ligand-Protein Contacts for 3HOY CSU: Contacts of Structural Units for 3HOY Likely Quarternary Molecular Structure file(s) for 3HOY Structure Factors (1709 Kb) Retrieve 3HOY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3HOY from S2C, [Save to disk] Re-refined 3hoy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3HOY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3hoy] [3hoy_A] [3hoy_B] [3hoy_C] [3hoy_D] [3hoy_E] [3hoy_F] [3hoy_G] [3hoy_H] [3hoy_I] [3hoy_J] [3hoy_K] [3hoy_L] [3hoy_N] [3hoy_P] [3hoy_T] SWISS-PROT database: [P20434] [P20435] [P20436] [P40422] [P22139] [P38902] [P04050] [P08518] [P16370] [P20433] [P34087] [P27999] Domains found in 3HOY: [RNA_pol_Rpb6] [RPOL4c] [RPOL8c] [RPOL9] [RPOLA_N] [RPOLCX] [RPOLD] [S1] [ZnF_C2C2 ] by SMART

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