3HUS	Blood Clotting	date	Jun 15, 2009
title	Crystal Structure Of Recombinant Gamma N308k Fibrinogen Frag With The Peptide Ligand Gly-Pro-Arg-Pro-Amide
authors	S.T.Lord, S.R.Bowley, N.Okumura
compound		source
Molecule: Fibrinogen Alpha Chain Chain: A, D Fragment: Fragment D: Unp Residues 145-210 Synonym: Fibrinopeptide A Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Fga Expression_system: Cricetulus Griseus Expression_system_taxid: 10029 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pmlp
Molecule: Fibrinogen Beta Chain Chain: B, E Fragment: Fragment D: Unp Residues 179-491 Synonym: Fibrinopeptide B Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Fgb Expression_system: Cricetulus Griseus Expression_system_taxid: 10029 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pmlp
Molecule: Fibrinogen Gamma Chain Chain: C, F Fragment: Fragment D: Unp Residues 122-432 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Fgg, Pro2061 Expression_system: Cricetulus Griseus Expression_system_taxid: 10029 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pmlp
Molecule: Peptide Ligand Gly-Pro-Arg-Pro-Amide Chain: G, H, I, J Engineered: Yes		Synthetic: Yes Other_details: Peptide Ligand Gly-Pro-Arg-Pro-Amide
symmetry	Space Group: P 43 21 2	R_factor 0.220 R_Free 0.288
crystal cell	length a length b length c angle alpha angle beta angle gamma 95.009 95.009 448.382 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.04 Å
ligand	CA, FUC, NAG	enzyme
Gene Ontology	Chain Function Process Component A, D E, B F, C
Primary reference	Impaired protofibril formation in fibrinogen N308K is due to altered D:D and A:a interactions., Bowley SR, Okumura N, Lord ST, Biochemistry. 2009 Aug 3. PMID:19650644

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (220 Kb) [Save to disk] Biological Unit Coordinates (3hus.pdb1.gz) 108 Kb Biological Unit Coordinates (3hus.pdb2.gz) 108 Kb LPC: Ligand-Protein Contacts for 3HUS CSU: Contacts of Structural Units for 3HUS Structure Factors (621 Kb) Retrieve 3HUS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3HUS from S2C, [Save to disk] Re-refined 3hus structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3HUS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3HUS

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3HUS, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3hus] [3hus_F] [3hus_G] [3hus_J] [3hus_B] [3hus_H] [3hus_D] [3hus_I] [3hus_A] [3hus_E] [3hus_C] SWISS-PROT database: [P02671] [P02675] [P02679] Domain organization of [FIBA_HUMAN] [FIBB_HUMAN] [FIBG_HUMAN] by SWISSPFAM Domain found in 3HUS: [FBG ] by SMART

Other resources with information on 3HUS

Community annotation for 3HUS at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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