3HY7	Hydrolase	date	Jun 22, 2009
title	Crystal Structure Of The Catalytic Domain Of Adamts-5 In Com Marimastat
authors	H.S.Shieh, J.M.Williams, N.Caspers, K.J.Mathis, M.D.Tortorella, A.Tomasselli
compound		source
Molecule: A Disintegrin And Metalloproteinase With Thrombos Motifs 5; Chain: A, B Fragment: Catalytic Domain (Unp Residues 262 To 480) Synonym: Adamts-5, Adam-Ts 5, Adam-Ts5, Aggrecanase-2, Admp Disintegrin And Metalloproteinase With Thrombospondin Motif Adamts-11, Adam-Ts 11; Ec: 3.4.24.- Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Adamts-5, Adamts11, Adamts5, Admp2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Mon208 Expression_system_vector_type: Plasmid Expression_system_plasmid: Ppha79257
symmetry	Space Group: P 1 21 1	R_factor 0.173 R_Free 0.224
crystal cell	length a length b length c angle alpha angle beta angle gamma 52.606 44.464 76.349 90.00 89.81 90.00
method	X-Ray Diffraction	resolution	1.69 Å
ligand	097, CA, ZN	enzyme	Hydrolase E.C.3.4.24 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural and inhibition analysis reveals the mechanism of selectivity of a series of aggrecanase inhibitors., Tortorella MD, Tomasselli AG, Mathis KJ, Schnute ME, Woodard SS, Munie G, Williams JM, Caspers N, Wittwer AJ, Malfait AM, Shieh HS, J Biol Chem. 2009 Sep 4;284(36):24185-91. Epub 2009 Jul 8. PMID:19586907

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (85 Kb) [Save to disk] Biological Unit Coordinates (3hy7.pdb1.gz) 41 Kb Biological Unit Coordinates (3hy7.pdb2.gz) 40 Kb LPC: Ligand-Protein Contacts for 3HY7 CSU: Contacts of Structural Units for 3HY7 Likely Quarternary Molecular Structure file(s) for 3HY7 Structure Factors (570 Kb) Retrieve 3HY7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3HY7 from S2C, [Save to disk] Re-refined 3hy7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3HY7 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3HY7

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3HY7, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3hy7_A] [3hy7_B] [3hy7] SWISS-PROT database: [Q9UNA0] Domain organization of [ATS5_HUMAN] by SWISSPFAM

Other resources with information on 3HY7

Community annotation for 3HY7 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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