3HZ7 Structural Genomics, Unknown Function date Jun 23, 2009
title Crystal Structure Of The Sira-Like Protein (Dsy4693) From Desulfitobacterium Hafniense, Northeast Structural Genomics Consortium Target Dhr2a
authors F.Forouhar, S.Lew, J.Seetharaman, S.Sahdev, R.Xiao, C.Ciccosanti, M.Maglaqui, J.K.Everett, R.Nair, T.B.Acton, B.Rost, G.T.Montelio L.Tong, J.F.Hunt, Northeast Structural Genomics Consortium (N
compound source
Molecule: Uncharacterized Protein
Chain: A
Fragment: Sequence Database Residues 1-79
Engineered: Yes
Organism_scientific: Desulfitobacterium Hafniense
Organism_taxid: 49338
Strain: Y51
Gene: Dsy4693
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)+ Magic
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet 21-23c
Expression_system_plasmid: Bl21
symmetry Space Group: P 43 21 2
R_factor 0.228 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.046 46.046 82.811 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand MSE, SX enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (17 Kb) [Save to disk]
  • Biological Unit Coordinates (3hz7.pdb1.gz) 13 Kb
  • LPC: Ligand-Protein Contacts for 3HZ7
  • CSU: Contacts of Structural Units for 3HZ7
  • Likely Quarternary Molecular Structure file(s) for 3HZ7
  • Structure Factors (160 Kb)
  • Retrieve 3HZ7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3HZ7 from S2C, [Save to disk]
  • Re-refined 3hz7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3HZ7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3HZ7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3HZ7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3hz7] [3hz7_A]
  • SWISS-PROT database: [Q24NB0]
  • Domain organization of [Q24NB0_DESHY] by SWISSPFAM
  • Other resources with information on 3HZ7
  • Community annotation for 3HZ7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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