3HZO Hydrolase date Jun 23, 2009
title Rv0554 From Mycobacterium Tuberculosis - The Structure Solve Tetragonal Crystal Form
authors J.M.Johnston, E.N.Baker
compound source
Molecule: Protein Rv0554, Putative Bromoperoxidase
Chain: A, B
Synonym: Possible Peroxidase Bpoc (Non-Haem Peroxidase)
Ec: 1.11.1.-
Engineered: Yes
 Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Strain: H37rv
Gene: Bpoc, Mt0580, Rv0554
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41 21 2
R_factor 0.163 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
100.779 100.779 135.112 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand EDO, MLA, NA enzyme Oxidoreductase E.C.1.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • peroxidase activity
  • bromide peroxidase activity


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (92 Kb) [Save to disk]
  • Biological Unit Coordinates (3hzo.pdb1.gz) 86 Kb
  • LPC: Ligand-Protein Contacts for 3HZO
  • CSU: Contacts of Structural Units for 3HZO
  • Structure Factors (342 Kb)
  • Retrieve 3HZO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3HZO from S2C, [Save to disk]
  • Re-refined 3hzo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3HZO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3HZO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3HZO, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3hzo_B] [3hzo] [3hzo_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3HZO
  • Community annotation for 3HZO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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