3I2H Hydrolase date Jun 29, 2009
title Cocaine Esterase With Mutation L169k, Bound To Dtt Adduct
authors J.J.G.Tesmer, M.R.Nance
compound source
Molecule: Cocaine Esterase
Chain: A
Ec: 3.1.1.-
Engineered: Yes
Mutation: Yes
Organism_scientific: Rhodococcus Sp. Mb1 'Bresler 1999'
Organism_taxid: 104109
Strain: Mb1
Gene: Cocaine Esterase, Coce
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl-21 Gold (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet 22b (+)
symmetry Space Group: P 65 2 2
R_factor 0.155 R_Free 0.146
crystal
cell
length a length b length c angle alpha angle beta angle gamma
105.438 105.438 222.188 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.65 Å
ligand CL, DBC, GOL, SO4 enzyme Hydrolase E.C.3.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • dipeptidyl-peptidase activit...


  • Primary referenceStructural analysis of thermostabilizing mutations of cocaine esterase., Narasimhan D, Nance MR, Gao D, Ko MC, Macdonald J, Tamburi P, Yoon D, Landry DM, Woods JH, Zhan CG, Tesmer JJ, Sunahara RK, Protein Eng Des Sel. 2010 Apr 30. PMID:20436035
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (120 Kb) [Save to disk]
  • Biological Unit Coordinates (3i2h.pdb1.gz) 225 Kb
  • LPC: Ligand-Protein Contacts for 3I2H
  • CSU: Contacts of Structural Units for 3I2H
  • Structure Factors (1265 Kb)
  • Retrieve 3I2H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3I2H from S2C, [Save to disk]
  • Re-refined 3i2h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Visual 3D analysis of 3I2H
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3I2H, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3i2h] [3i2h_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3I2H: [PepX_C ] by SMART
  • Other resources with information on 3I2H
  • Community annotation for 3I2H at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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