3I2V Transferase date Jun 29, 2009
title Crystal Structure Of Human Mocs3 Rhodanese-Like Domain
authors J.P.Bacik, J.R.Walker, L.Lopez, Y.Li, J.Weigelt, C.Bountra, C.H.Arrowsmith, A.M.Edwards, A.Bochkarev, S.Dhe-Paganon, Structural Genomics Consortium (Sgc)
compound source
Molecule: Adenylyltransferase And Sulfurtransferase Mocs3
Chain: A
Fragment: Rhodanese-Like Domain, Residues 335-460
Synonym: Molybdenum Cofactor Synthesis Protein 3, Molybdopterin Synthase Sulfurylase, Mpt Synthase Sulfurylase, Adenylyltransferase Mocs3, Sulfurtransferase Mocs3;
Ec: 2.7.7.-, 2.8.1.-
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mocs3, Mocs3_human, Uba4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28alic
symmetry Space Group: P 1 21 1
R_factor 0.159 R_Free 0.204
crystal
cell
length a length b length c angle alpha angle beta angle gamma
36.817 31.911 50.640 90.00 110.16 90.00
method X-Ray Diffractionresolution 1.25 Å
ligand MSE enzyme Transferase E.C.2.7.7 BRENDA
note 3I2V is a representative structure
Gene MOCS3 (H. sapiens)
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (3i2v.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 3I2V
  • CSU: Contacts of Structural Units for 3I2V
  • Likely Quarternary Molecular Structure file(s) for 3I2V
  • Structure Factors (231 Kb)
  • Retrieve 3I2V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3I2V from S2C, [Save to disk]
  • Re-refined 3i2v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3I2V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3I2V
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3I2V, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3i2v_A] [3i2v]
  • SWISS-PROT database: [O95396]
  • Domain organization of [MOCS3_HUMAN] by SWISSPFAM
  • Domain found in 3I2V: [RHOD ] by SMART
    • Other resources with information on 3I2V
  • Community annotation for 3I2V at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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