3I35 Transport Protein date Jun 30, 2009
title Human Sh3 Domain Of Protein Lasp1
authors M.I.Siponen, A.K.Roos, C.H.Arrowsmith, H.Berglund, C.Bountra, R.C A.M.Edwards, S.Flodin, A.Flores, S.Graslund, M.Hammarstrom, A.Jo I.Johansson, T.Karlberg, T.Kotenyova, A.Kotzsch, T.Kragh Nielse M.Moche, T.Nyman, C.Persson, J.Sagemark, H.Schueler, P.Schutz, A.G.Thorsell, L.Tresaugues, S.Van Den Berg, J.Weigelt, M.Welin, M.Wisniewska, P.Nordlund, Structural Genomics Consortium (Sgc
compound source
Molecule: Lim And Sh3 Domain Protein 1
Chain: A
Fragment: Sh3 Domain
Synonym: Lasp-1, Mln 50
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Lasp1, Mln50
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)R3 Prare
Expression_system_vector_type: Pnic-Bsa4
symmetry Space Group: P 1 2 1
R_factor 0.202 R_Free 0.222
crystal
cell
length a length b length c angle alpha angle beta angle gamma
25.348 23.235 44.716 90.00 92.47 90.00
method X-Ray Diffractionresolution 1.40 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (15 Kb) [Save to disk]
  • Biological Unit Coordinates (3i35.pdb1.gz) 11 Kb
  • CSU: Contacts of Structural Units for 3I35
  • Structure Factors (140 Kb)
  • Retrieve 3I35 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3I35 from S2C, [Save to disk]
  • Re-refined 3i35 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3I35 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3I35
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3I35, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3i35_A] [3i35]
  • SWISS-PROT database: [Q14847]
  • Domain organization of [LASP1_HUMAN] by SWISSPFAM
  • Domain found in 3I35: [SH3 ] by SMART
  • Other resources with information on 3I35
  • Community annotation for 3I35 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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