3IAG	Transcription Dna	date	Jul 13, 2009
title	Csl (Rbp-Jk) Bound To Hes-1 Nonconsensus Site
authors	D.R.Friedmann, R.A.Kovall
compound		source
Molecule: 5'-D(Apaptpcptptptpcpapcpapcpgpapt Chain: A Engineered: Yes		Synthetic: Yes Other_details: Synthesized
Molecule: 5'-D(Tptpaptpcpgptpgptpgpapapapgpa Chain: B Engineered: Yes		Synthetic: Yes Other_details: Synthesized
Molecule: Recombining Binding Protein Suppressor Of Hairles Chain: C Synonym: J Kappa-Recombination Signal-Binding Protein, Rbp- Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Igkjrb1, Igkrsbp, Rbp-Jk, Rbpj, Rbpsuh Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex6p-1
symmetry	Space Group: P 21 21 2	R_factor 0.197 R_Free 0.243
crystal cell	length a length b length c angle alpha angle beta angle gamma 63.451 93.137 112.569 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	EDO, XYL	enzyme
Gene Ontology	Chain Function Process Component C
Primary reference	Thermodynamic and structural insights into CSL-DNA complexes., Friedmann DR, Kovall RA, Protein Sci. 2010 Jan;19(1):34-46. PMID:19866488

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk] Biological Unit Coordinates (3iag.pdb1.gz) 83 Kb LPC: Ligand-Protein Contacts for 3IAG CSU: Contacts of Structural Units for 3IAG Structure Factors (656 Kb) Retrieve 3IAG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3IAG from S2C, [Save to disk] Re-refined 3iag structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3IAG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3IAG

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3IAG, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3iag] [3iag_A] [3iag_C] [3iag_B] SWISS-PROT database: [P31266] Domain organization of [SUH_MOUSE] by SWISSPFAM Domains found in 3IAG: [BTD] [LAG1_DNAbind ] by SMART

Other resources with information on 3IAG

Community annotation for 3IAG at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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