3IK7 Transferase date Aug 05, 2009
title Human Glutathione Transferase A4-4 With Gsdhn
authors L.M.Balogh, I.Le Trong, W.M.Atkins, R.E.Stenkamp
compound source
Molecule: Glutathione S-Transferase A4
Chain: A, B, C, D
Synonym: Glutathione S-Transferase A4-4, Gst Class-Alpha Me
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gsta4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.206 R_Free 0.252
length a length b length c angle alpha angle beta angle gamma
59.023 153.041 60.831 90.00 103.10 90.00
method X-Ray Diffractionresolution 1.97 Å
ligand BOB, SO4 enzyme Transferase E.C. BRENDA
A, D, C, B

Primary referenceSubstrate specificity combined with stereopromiscuity in glutathione transferase A4-4-dependent metabolism of 4-hydroxynonenal., Balogh LM, Le Trong I, Kripps KA, Shireman LM, Stenkamp RE, Zhang W, Mannervik B, Atkins WM, Biochemistry. 2010 Feb 23;49(7):1541-8. PMID:20085333
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (155 Kb) [Save to disk]
  • Biological Unit Coordinates (3ik7.pdb1.gz) 77 Kb
  • Biological Unit Coordinates (3ik7.pdb2.gz) 76 Kb
  • LPC: Ligand-Protein Contacts for 3IK7
  • CSU: Contacts of Structural Units for 3IK7
  • Structure Factors (974 Kb)
  • Retrieve 3IK7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3IK7 from S2C, [Save to disk]
  • Re-refined 3ik7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3IK7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3IK7
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3IK7, from MSDmotif at EBI
  • Fold representative 3ik7 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ik7_C] [3ik7_A] [3ik7] [3ik7_D] [3ik7_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3IK7
  • Community annotation for 3IK7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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