3IQO Metal Binding Protein date Aug 20, 2009
title 1.5 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b
authors T.H.Charpentier, D.J.Weber, E.A.Toth
compound source
Molecule: Protein S100-B
Chain: A, B
Synonym: S100 Calcium-Binding Protein B, S-100 Protein Subu S-100 Protein Beta Chain;
Engineered: Yes
Organism_scientific: Bos Taurus
Organism_common: Bovine,Cow,Domestic Cattle,Domestic Cow
Organism_taxid: 9913
Gene: S100b
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11b
symmetry Space Group: C 1 2 1
R_factor 0.200 R_Free 0.242
crystal
cell
length a length b length c angle alpha angle beta angle gamma
89.637 35.044 58.113 90.00 92.62 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • kinase inhibitor activity


  • Primary referenceThe Effects of CapZ Peptide (TRTK-12) Binding to S100B-Ca(2+) as Examined by NMR and X-ray Crystallography., Charpentier TH, Thompson LE, Liriano MA, Varney KM, Wilder PT, Pozharski E, Toth EA, Weber DJ, J Mol Biol. 2010 Jan 4. PMID:20053360
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (3iqo.pdb1.gz) 31 Kb
  • Biological Unit Coordinates (3iqo.pdb2.gz) 32 Kb
  • LPC: Ligand-Protein Contacts for 3IQO
  • CSU: Contacts of Structural Units for 3IQO
  • Structure Factors (378 Kb)
  • Retrieve 3IQO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3IQO from S2C, [Save to disk]
  • Re-refined 3iqo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3IQO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3IQO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3IQO, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3iqo_B] [3iqo_A] [3iqo]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3IQO: [S_100 ] by SMART
  • Other resources with information on 3IQO
  • Community annotation for 3IQO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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