3ITZ	Transferase	date	Aug 28, 2009
title	Crystal Structure Of P38a Mitogen-Activated Protein Kinase I With A Pyrazolopyridazine Inhibitor
authors	C.Mohr, S.Jordan
compound		source
Molecule: Mitogen-Activated Protein Kinase 14 Chain: A Synonym: Mitogen-Activated Protein Kinase P38 Alpha, Map Ki Alpha, Cytokine Suppressive Anti-Inflammatory Drug-Binding Csaid-Binding Protein, Csbp, Max-Interacting Protein 2, Map Mxi2, Sapk2a; Ec: 2.7.11.24 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mapk14, Csbp, Csbp1, Csbp2, Cspb1, Mxi2 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.214 R_Free 0.249
crystal cell	length a length b length c angle alpha angle beta angle gamma 45.245 87.847 121.258 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.25 Å
ligand	P66 BindingDB	enzyme	Transferase E.C.2.7.11.24 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Part 2: Structure-activity relationship (SAR) investigations of fused pyrazoles as potent, selective and orally available inhibitors of p38alpha mitogen-activated protein kinase., Wurz RP, Pettus LH, Henkle B, Sherman L, Plant M, Miner K, McBride HJ, Wong LM, Saris CJ, Lee MR, Chmait S, Mohr C, Hsieh F, Tasker AS, Bioorg Med Chem Lett. 2010 Mar 1;20(5):1680-4. Epub 2010 Jan 21. PMID:20138761

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk] Biological Unit Coordinates (3itz.pdb1.gz) 59 Kb LPC: Ligand-Protein Contacts for 3ITZ CSU: Contacts of Structural Units for 3ITZ Structure Factors (330 Kb) Retrieve 3ITZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3ITZ from S2C, [Save to disk] Re-refined 3itz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3ITZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3ITZ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3ITZ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3itz] [3itz_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3ITZ: [S_TKc ] by SMART

Other resources with information on 3ITZ

Community annotation for 3ITZ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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