3IUC Chaperone date Aug 31, 2009
title Crystal Structure Of The Human 70kda Heat Shock Protein 5 (B Atpase Domain In Complex With Adp
authors M.Wisniewska, T.Karlberg, C.H.Arrowsmith, H.Berglund, C.Bountra, R.Collins, A.M.Edwards, S.Flodin, A.Flores, S.Graslund, M.Hammar A.Johansson, I.Johansson, A.Kallas, T.Kotyenova, A.Kotzch, P.Kra N.Markova, M.Moche, T.K.Nielsen, P.Nordlund, T.Nyman, C.Persson, P.Schutz, M.I.Siponen, L.Svensson, A.G.Thorsell, L.Tresaugues, S Berg, E.Wahlberg, J.Weigelt, M.Welin, H.Schuler, Structural Geno Consortium (Sgc)
compound source
Molecule: Heat Shock 70kda Protein 5 (Glucose-Regulated Pro 78kda);
Chain: A, C
Fragment: Atpase Domain, Unp Residue 26-410
Synonym: 70kda Heat Shock Protein 5 (Bip), Heat Shock 70kda (Glucose-Regulated Protein, 78kda), Isoform Cra_a;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3) R3 Prare
Expression_system_vector_type: Pnic-Bsa4
symmetry Space Group: P 1
R_factor 0.190 R_Free 0.270
crystal
cell
length a length b length c angle alpha angle beta angle gamma
48.212 51.795 94.994 98.85 94.88 117.61
method X-Ray Diffractionresolution 2.40 Å
ligand ADP, CA enzyme
Primary referenceCrystal structures of the ATPase domains of four human Hsp70 isoforms: HSPA1L/Hsp70-hom, HSPA2/Hsp70-2, HSPA6/Hsp70B', and HSPA5/BiP/GRP78., Wisniewska M, Karlberg T, Lehtio L, Johansson I, Kotenyova T, Moche M, Schuler H, PLoS One. 2010 Jan 11;5(1):e8625. PMID:20072699
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (132 Kb) [Save to disk]
  • Biological Unit Coordinates (3iuc.pdb1.gz) 126 Kb
  • Biological Unit Coordinates (3iuc.pdb2.gz) 64 Kb
  • Biological Unit Coordinates (3iuc.pdb3.gz) 65 Kb
  • LPC: Ligand-Protein Contacts for 3IUC
  • CSU: Contacts of Structural Units for 3IUC
  • Structure Factors (453 Kb)
  • Retrieve 3IUC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3IUC from S2C, [Save to disk]
  • Re-refined 3iuc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3IUC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3IUC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3IUC, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3iuc] [3iuc_C] [3iuc_A]
  • SWISS-PROT database: [P11021]
  • Belongs to the cation channel-forming heat shock protein-70 (hsp70) family according to TCDB.
  • Domain organization of [GRP78_HUMAN] by SWISSPFAM
  • Other resources with information on 3IUC
  • Community annotation for 3IUC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science