3IUE Ligase date Aug 31, 2009
title Crystal Structure Of Pantothenate Synthetase In Complex With Methoxy-2-(5-Methylpyridin-2-Ylsulfonylcarbamoyl)-1h-Indol- Acetic Acid
authors H.L.Silvestre, S.Wen, A.W.Hung, A.Ciulli, T.L.Blundell, C.Abell
compound source
Molecule: Pantothenate Synthetase
Chain: A, B
Fragment: Unp Residues 1-301
Synonym: Ps, Pantoate-Beta-Alanine Ligase, Pantoate-Activat Enzyme;
Ec: 6.3.2.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Strain: H37rv
Gene: Mt3707, Mtcy07h7b.20, Panc, Rv3602c
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta 2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet30a
symmetry Space Group: P 1 21 1
R_factor 0.172 R_Free 0.208
crystal
cell
length a length b length c angle alpha angle beta angle gamma
48.550 70.710 81.840 90.00 99.37 90.00
method X-Ray Diffractionresolution 1.73 Å
ligand EDO, EOH, FG3, GOL BindingDB enzyme Ligase E.C.6.3.2.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceApplication of Fragment Growing and Fragment Linking to the Discovery of Inhibitors of Mycobacterium tuberculosis Pantothenate Synthetase., Hung AW, Silvestre HL, Wen S, Ciulli A, Blundell TL, Abell C, Angew Chem Int Ed Engl. 2009 Sep 24. PMID:19780086
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk]
  • Biological Unit Coordinates (3iue.pdb1.gz) 100 Kb
  • Biological Unit Coordinates (3iue.pdb2.gz) 51 Kb
  • Biological Unit Coordinates (3iue.pdb3.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 3IUE
  • CSU: Contacts of Structural Units for 3IUE
  • Structure Factors (858 Kb)
  • Retrieve 3IUE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3IUE from S2C, [Save to disk]
  • Re-refined 3iue structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3IUE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3IUE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3IUE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3iue] [3iue_A] [3iue_B]
  • SWISS-PROT database: [P0A5R0]
  • Domain organization of [PANC_MYCTU] by SWISSPFAM
  • Other resources with information on 3IUE
  • Community annotation for 3IUE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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