3IV4 Oxidoreductase date Aug 31, 2009
title A Putative Oxidoreductase With A Thioredoxin Fold
authors Y.Fan, X.Xu, H.Cui, J.Ng, A.Savchenko, A.Joachimiak, A.Edwards, Mid Center For Structural Genomics (Mcsg)
compound source
Molecule: Putative Oxidoreductase
Chain: A
Synonym: Putative Uncharacterized Protein Sa0696
Engineered: Yes
 Organism_scientific: Staphylococcus Aureus Subsp. Aureus
Organism_taxid: 158879
Strain: N315
Gene: Sa0696
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Ppk1037
symmetry Space Group: C 1 2 1
R_factor 0.153 R_Free 0.190
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.830 33.078 47.325 90.00 102.71 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand MSE enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (3iv4.pdb1.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 3IV4
  • CSU: Contacts of Structural Units for 3IV4
  • Structure Factors (200 Kb)
  • Retrieve 3IV4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3IV4 from S2C, [Save to disk]
  • Re-refined 3iv4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3IV4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3IV4
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3IV4, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3iv4] [3iv4_A]
  • SWISS-PROT database: [Q7A6S3]
  • Domain organization of [Q7A6S3_STAAN] by SWISSPFAM
    • Other resources with information on 3IV4
  • Community annotation for 3IV4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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