3IXE Signaling Protein Signaling Protein date Sep 03, 2009
title Structural Basis Of Competition Between Pinch1 And Pinch2 Fo To The Ankyrin Repeat Domain Of Integrin-Linked Kinase
authors B.P.Chiswell, A.L.Stiegler, T.J.Boggon, D.A.Calderwood
compound source
Molecule: Integrin-Linked Protein Kinase
Chain: A
Fragment: Ankyrin Repeat Domain
Synonym: Ilk-1, Ilk-2, 59 Kda Serinethreonine-Protein Kina P59ilk;
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ilk, Ilk1, Ilk2
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-4t-1

Molecule: Lim And Senescent Cell Antigen-Like-Containing Do Protein 2;
Chain: B
Fragment: Lim1 Domain
Synonym: Particularly Interesting New Cys-His Protein 2, Pi Lim-Like Protein 2;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Lims2, Pinch2
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet32
symmetry Space Group: P 21 21 21
R_factor 0.170 R_Free 0.220
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.416 72.010 83.937 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand ZN enzyme Transferase E.C.2.7.11.1 BRENDA
Primary referenceStructural basis of competition between PINCH1 and PINCH2 for binding to the ankyrin repeat domain of integrin-linked kinase., Chiswell BP, Stiegler AL, Razinia Z, Nalibotski E, Boggon TJ, Calderwood DA, J Struct Biol. 2009 Dec 3. PMID:19963065
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (3ixe.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 3IXE
  • CSU: Contacts of Structural Units for 3IXE
  • Structure Factors (300 Kb)
  • Retrieve 3IXE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3IXE from S2C, [Save to disk]
  • Re-refined 3ixe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3IXE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3IXE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3IXE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ixe_B] [3ixe_A] [3ixe]
  • SWISS-PROT database: [Q13418] [Q7Z4I7]
  • Domain organization of [ILK_HUMAN] [LIMS2_HUMAN] by SWISSPFAM
  • Domains found in 3IXE: [ANK] [LIM ] by SMART
  • Other resources with information on 3IXE
  • Community annotation for 3IXE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science