3J8J Structural Protein date Nov 07, 2014
title Tilted State Of Actin, T1
authors V.E.Galkin, A.Orlova, M.R.Vos, G.F.Schroder, E.H.Egelman
compound source
Molecule: Actin, Alpha Skeletal Muscle
Chain: A, B, C, D, E, F, G, H, I, J, K
Synonym: Alpha-Actin-1
 Organism_scientific: Oryctolagus Cuniculus
Organism_common: Rabbit
Organism_taxid: 9986
Tissue: Skeletal Muscle
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 12.00 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, K, E, B, H, C, D, I, G


Primary referenceNear-atomic resolution for one state of f-actin., Galkin VE, Orlova A, Vos MR, Schroder GF, Egelman EH, Structure. 2015 Jan 6;23(1):173-82. doi: 10.1016/j.str.2014.11.006. Epub 2014 Dec, 18. PMID:25533486
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (586 Kb) [Save to disk]
  • Biological Unit Coordinates (3j8j.pdb1.gz) 582 Kb
  • CSU: Contacts of Structural Units for 3J8J
  • Retrieve 3J8J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3J8J from S2C, [Save to disk]
    • View 3J8J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3J8J
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3J8J, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3j8j_F] [3j8j_I] [3j8j] [3j8j_K] [3j8j_B] [3j8j_G] [3j8j_C] [3j8j_E] [3j8j_J] [3j8j_D] [3j8j_H] [3j8j_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3J8J: [ACTIN ] by SMART
    • Other resources with information on 3J8J
  • Community annotation for 3J8J at PDBWiki (http://pdbwiki.org)

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