3J96	Hydrolase	date	Dec 05, 2014
title	Structure Of 20s Supercomplex Determined By Single Particle Cryoelectron Microscopy (State I)
authors	M.Zhao, S.Wu, Y.Cheng, A.T.Brunger
compound		source
Molecule: Vesicle-Fusing Atpase Chain: A, B, C, D, E, F Synonym: N-Ethylmaleimide-Sensitive Fusion Protein, Nem-Sen Fusion Protein, Vesicular-Fusion Protein Nsf, N-Ethylmaleim Sensitive Factor; Ec: 3.6.4.6 Engineered: Yes		Organism_scientific: Cricetulus Griseus Organism_common: Chinese Hamster Organism_taxid: 10029 Gene: Nsf Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Alpha-Soluble Nsf Attachment Protein Chain: G, H, I, J Synonym: Snap-Alpha, N-Ethylmaleimide-Sensitive Factor Atta Protein Alpha, Alpha-Snap; Engineered: Yes		Organism_scientific: Rattus Norvegicus Organism_common: Rat Organism_taxid: 10116 Gene: Napa, Snap, Snapa Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Vesicle-Associated Membrane Protein 2 Chain: K Fragment: Unp Residues 28-89 Synonym: Vamp-2, Synaptobrevin-2 Engineered: Yes		Organism_scientific: Rattus Norvegicus Organism_common: Rat Organism_taxid: 10116 Gene: Vamp2, Syb2 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Syntaxin-1a Chain: L Fragment: Unp Residues 191-256 Synonym: Neuron-Specific Antigen Hpc-1, Synaptotagmin-Assoc Kda Protein, P35a; Engineered: Yes		Organism_scientific: Rattus Norvegicus Organism_common: Rat Organism_taxid: 10116 Gene: Stx1a, Sap Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Synaptosomal-Associated Protein 25 Chain: M Synonym: Snap-25, Super Protein, Sup, Synaptosomal-Associat Protein; Engineered: Yes		Organism_scientific: Rattus Norvegicus Organism_common: Rat Organism_taxid: 10116 Gene: Snap25, Snap Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	7.60 Å
ligand		enzyme	Hydrolase E.C.3.6.4.6 BRENDA
Gene Ontology	Chain Function Process Component F, A, E, B, C, D J, H, I, G K L M voltage-gated potassium chan...
Primary reference	Mechanistic insights into the recycling machine of the SNARE complex., Zhao M, Wu S, Zhou Q, Vivona S, Cipriano DJ, Cheng Y, Brunger AT, Nature. 2015 Jan 12. doi: 10.1038/nature14148. PMID:25581794

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (724 Kb) [Save to disk] Biological Unit Coordinates (3j96.pdb1.gz) 714 Kb CSU: Contacts of Structural Units for 3J96 Retrieve 3J96 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3J96 from S2C, [Save to disk]

View 3J96 in 3D

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Visual 3D analysis of 3J96

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3J96, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3j96_D] [3j96_H] [3j96_I] [3j96_K] [3j96_L] [3j96_F] [3j96_G] [3j96_C] [3j96] [3j96_B] [3j96_J] [3j96_M] [3j96_A] [3j96_E] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3J96: [AAA] [CDC48_2] [CDC48_N] [t_SNARE ] by SMART

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