3J9P Structure of the TRPA1 ion channel determined by electron cryo-microscopy date
authors Paulsen, C.E., Armache, J.P., Gao, Y., Cheng, Y., Julius, D.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 4.24
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • carbohydrate transmembrane t...
  • calcium-release channel acti...


  • Primary referenceStructure of the TRPA1 ion channel suggests regulatory mechanisms., Paulsen CE, Armache JP, Gao Y, Cheng Y, Julius D, Nature. 2015 Apr 8. doi: 10.1038/nature14367. PMID:25855297
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (312 Kb) [Save to disk]
  • Biological Unit Coordinates (3j9p.pdb1.gz) 305 Kb
  • CSU: Contacts of Structural Units for 3J9P
  • Retrieve 3J9P in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3J9P from S2C, [Save to disk]
  • View 3J9P in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3J9P
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3J9P, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3j9p_C] [3j9p_A] [3j9p_B] [3j9p_D] [3j9p]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3J9P: [ANK ] by SMART
  • Other resources with information on 3J9P
  • Community annotation for 3J9P at PDBWiki (http://pdbwiki.org)

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