3JBM Virus date Sep 06, 2015
title Electron Cryo-Microscopy Of A Virus-Like Particle Of Orange- Grouper Nervous Necrosis Virus
authors J.Xie, K.Li, Y.Gao, R.Huang, Y.Lai, Y.Shi, S.Yang, G.Zhu, Q.Zhang, J.
compound source
Molecule: Virus-Like Particle Of Orange-Spotted Grouper Ner Necrosis Virus;
Chain: A, B, C
Engineered: Yes
Organism_scientific: Orange-Spotted Grouper Nervous Necrosi
Organism_common: Orange-Spotted Grouper
Organism_taxid: 421750
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.90 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (22 Kb) [Save to disk]
  • Biological Unit Coordinates (3jbm.pdb1.gz) 563 Kb
  • CSU: Contacts of Structural Units for 3JBM
  • Retrieve 3JBM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3JBM from S2C, [Save to disk]
  • View 3JBM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3JBM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3jbm_C] [3jbm_A] [3jbm_B] [3jbm]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3JBM
  • Community annotation for 3JBM at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science