3JCM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GTP, M7M enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • metallopeptidase activity


    • B


    G


    H


    I


    J, R


    K


    L


    M


    N


    O, S


    Q, U


    T, P


    X, a


    Y, V


    Z, W


    b


    c


    d


    e


    f


    g


    h


    Primary referenceThe 3.8 A structure of the U4/U6.U5 tri-snRNP: Insights into spliceosome assembly and catalysis., Wan R, Yan C, Bai R, Wang L, Huang M, Wong CC, Shi Y, Science. 2016 Jan 29;351(6272):466-75. doi: 10.1126/science.aad6466. Epub 2016, Jan 7. PMID:26743623
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1214 Kb) [Save to disk]
  • Biological Unit Coordinates (3jcm.pdb1.gz) 1176 Kb
  • LPC: Ligand-Protein Contacts for 3JCM
  • CSU: Contacts of Structural Units for 3JCM
  • Retrieve 3JCM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3JCM from S2C, [Save to disk]
    • View 3JCM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3jcm] [3jcm_A] [3jcm_B] [3jcm_C] [3jcm_D] [3jcm_E] [3jcm_F] [3jcm_G] [3jcm_H] [3jcm_I] [3jcm_J] [3jcm_K] [3jcm_L] [3jcm_M] [3jcm_N] [3jcm_O] [3jcm_P] [3jcm_Q] [3jcm_R] [3jcm_S] [3jcm_T] [3jcm_U] [3jcm_V] [3jcm_W] [3jcm_X] [3jcm_Y] [3jcm_Z] [3jcm_a] [3jcm_b] [3jcm_c] [3jcm_d] [3jcm_e] [3jcm_f] [3jcm_g] [3jcm_h]
  • SWISS-PROT database:
  • Domains found in 3JCM: [AAA] [DEXDc] [DIM1] [EFG_C] [EFG_IV] [HAT] [HELICc] [JAB_MPN] [NOSIC] [SFM] [Sec63] [Sm] [TPR] [WD40 ] by SMART

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