3JRQ Hydrolase Hormone Receptor date Sep 08, 2009
title Crystal Structure Of (+)-Aba-Bound Pyl1 In Complex With Abi1
authors K.Miyazono, T.Miyakawa, Y.Sawano, K.Kubota, M.Tanokura
compound source
Molecule: Protein Phosphatase 2c 56
Chain: A
Fragment: Unp Residues 125-429
Synonym: Atpp2c56, Protein Phosphatase 2c Abi1, Pp2c Abi1, Abscisic Acid-Insensitive 1;
Ec: 3.1.3.16
Engineered: Yes
Organism_scientific: Arabidopsis Thaliana
Organism_common: Mouse-Ear Cress
Organism_taxid: 3702
Gene: Abi1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a

Molecule: Putative Uncharacterized Protein At5g46790
Chain: B
Fragment: Unp Residues 28-210
Synonym: Pyl1
Engineered: Yes

Organism_scientific: Arabidopsis Thaliana
Organism_common: Mouse-Ear Cress
Organism_taxid: 3702
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: P 1 21 1
R_factor 0.198 R_Free 0.249
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.010 60.620 84.960 90.00 104.56 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand A8S enzyme Hydrolase E.C.3.1.3.16 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis of abscisic acid signalling., Miyazono K, Miyakawa T, Sawano Y, Kubota K, Kang HJ, Asano A, Miyauchi Y, Takahashi M, Zhi Y, Fujita Y, Yoshida T, Kodaira KS, Yamaguchi-Shinozaki K, Tanokura M, Nature. 2009 Dec 3;462(7273):609-14. PMID:19855379
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (3jrq.pdb1.gz) 73 Kb
  • LPC: Ligand-Protein Contacts for 3JRQ
  • CSU: Contacts of Structural Units for 3JRQ
  • Structure Factors (386 Kb)
  • Retrieve 3JRQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3JRQ from S2C, [Save to disk]
  • Re-refined 3jrq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3JRQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3JRQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3JRQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3jrq] [3jrq_A] [3jrq_B]
  • SWISS-PROT database: [P49597] [Q8VZS8]
  • Domain organization of [P2C56_ARATH] [PYL1_ARATH] by SWISSPFAM
  • Domains found in 3JRQ: [PP2C_SIG] [PP2Cc ] by SMART
  • Other resources with information on 3JRQ
  • Community annotation for 3JRQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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