3JT0 Structural Protein date Sep 11, 2009
title Crystal Structure Of The C-Terminal Fragment (426-558) Lamin Homo Sapiens, Northeast Structural Genomics Consortium Targ
authors A.Kuzin, M.Abashidze, J.Seetharaman, S.Sahdev, R.Xiao, C.Ciccosan R.L.Belote, J.K.Everett, R.Nair, T.B.Acton, B.Rost, G.T.Montelio L.Tong, J.F.Hunt, Northeast Structural Genomics Consortium (N
compound source
Molecule: Lamin-B1
Chain: A, B
Fragment: Residues 426-558
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Lmn2, Lmnb, Lmnb1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)+ Magic
Expression_system_vector_type: Pet 14-15c
Expression_system_plasmid: Bl21
symmetry Space Group: P 21 21 21
R_factor 0.238 R_Free 0.245
crystal
cell
length a length b length c angle alpha angle beta angle gamma
39.437 72.793 81.402 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.39 Å
ligand MSE enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk]
  • Biological Unit Coordinates (3jt0.pdb1.gz) 36 Kb
  • Biological Unit Coordinates (3jt0.pdb2.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 3JT0
  • CSU: Contacts of Structural Units for 3JT0
  • Structure Factors (235 Kb)
  • Retrieve 3JT0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3JT0 from S2C, [Save to disk]
  • Re-refined 3jt0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3JT0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3JT0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3JT0, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3jt0] [3jt0_B] [3jt0_A]
  • SWISS-PROT database: [P20700]
  • Domain organization of [LMNB1_HUMAN] by SWISSPFAM
  • Other resources with information on 3JT0
  • Community annotation for 3JT0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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