3JTK Transferase date Sep 12, 2009
title Crystal Structure Of Human Type-I N-Myristoyltransferase Wit Myristoyl-Coa And Inhibitor Ddd90055
authors W.Qiu, A.Hutchinson, A.Wernimont, Y.H.Lin, A.Kania, M.Ravichandr I.Kozieradzki, D.Cossar, M.Schapira, C.H.Arrowsmith, C.Bountra, J.Weigelt, A.M.Edwards, P.G.Wyatt, M.A.J.Ferguson, J.A.Frearson S.Y.Brand, D.A.Robinson, A.Bochkarev, R.Hui, Structural Genomic Consortium (Sgc)
compound source
Molecule: Glycylpeptide N-Tetradecanoyltransferase 1
Chain: A, B
Synonym: Peptide N-Myristoyltransferase 1, Myristoyl-Coa:Pr Myristoyltransferase 1, Nmt 1, Type I N-Myristoyltransferas
Ec: 2.3.1.97
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nmt, Nmt1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 2 21 21
R_factor 0.198 R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.247 79.023 178.381 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.61 Å
ligand MYA, X55 enzyme Transferase E.C.2.3.1.97 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (149 Kb) [Save to disk]
  • Biological Unit Coordinates (3jtk.pdb1.gz) 73 Kb
  • Biological Unit Coordinates (3jtk.pdb2.gz) 74 Kb
  • LPC: Ligand-Protein Contacts for 3JTK
  • CSU: Contacts of Structural Units for 3JTK
  • Structure Factors (1559 Kb)
  • Retrieve 3JTK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3JTK from S2C, [Save to disk]
  • Re-refined 3jtk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3JTK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3JTK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3JTK, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3jtk_B] [3jtk] [3jtk_A]
  • SWISS-PROT database: [P30419]
  • Domain organization of [NMT1_HUMAN] by SWISSPFAM
  • Other resources with information on 3JTK
  • Community annotation for 3JTK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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