3JUB	Transferase	date	Sep 15, 2009
title	Human Gamma-Glutamylamine Cyclotransferase
authors	A.J.Oakley
compound		source
Molecule: Aig2-Like Domain-Containing Protein 1 Chain: A Synonym: Gamma-Glutamylamine Cyclotransferase Ec: 2.3.2.4 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: A2ld1, Ggact Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Phue
symmetry	Space Group: P 21 21 21	R_factor 0.123 R_Free 0.149
crystal cell	length a length b length c angle alpha angle beta angle gamma 35.995 41.940 84.012 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.20 Å
ligand	NO3	enzyme	Transferase E.C.2.3.2.4 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Identification and characterization of {gamma}-glutamylamine cyclotransferase: An enzyme responsible for {gamma}-glutamyl-{epsilon}-lysine catabolism., Oakley AJ, Coggan M, Board PG, J Biol Chem. 2010 Jan 28. PMID:20110353

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk] Biological Unit Coordinates (3jub.pdb1.gz) 56 Kb LPC: Ligand-Protein Contacts for 3JUB CSU: Contacts of Structural Units for 3JUB Structure Factors (554 Kb) Retrieve 3JUB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3JUB from S2C, [Save to disk] Re-refined 3jub structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3JUB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3JUB

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3JUB, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3jub] [3jub_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3JUB

Community annotation for 3JUB at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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