3JUX	Protein Transport	date	Sep 15, 2009
title	Structure Of The Translocation Atpase Seca From Thermotoga M
authors	J.Zimmer
compound		source
Molecule: Protein Translocase Subunit Seca Chain: A Engineered: Yes		Organism_scientific: Thermotoga Maritima Organism_taxid: 2336 Strain: Dsm 3109 Gene: Seca, Tm_1578 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: C43 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a
symmetry	Space Group: P 21 21 21	R_factor 0.227 R_Free 0.303
crystal cell	length a length b length c angle alpha angle beta angle gamma 64.533 119.403 120.820 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.10 Å
ligand	ADP, MG	enzyme
Gene	TM
Gene Ontology	Chain Function Process Component A
Primary reference	Conformational Flexibility and Peptide Interaction of the Translocation ATPase SecA., Zimmer J, Rapoport TA, J Mol Biol. 2009 Oct 20. PMID:19850053

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (136 Kb) [Save to disk] Biological Unit Coordinates (3jux.pdb1.gz) 131 Kb LPC: Ligand-Protein Contacts for 3JUX CSU: Contacts of Structural Units for 3JUX Structure Factors (141 Kb) Retrieve 3JUX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3JUX from S2C, [Save to disk] Re-refined 3jux structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3JUX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3JUX

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3JUX, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3jux] [3jux_A] SWISS-PROT database: [Q9X1R4] Domain organization of [SECA_THEMA] by SWISSPFAM Domains found in 3JUX: [SecA_DEAD] [SecA_PP_bind ] by SMART

Other resources with information on 3JUX

Community annotation for 3JUX at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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