3JVX Oxidoreductase Oxidoreductase Inhibitor date Sep 17, 2009
title Crystal Structure Of Bacillus Anthracis Dihydrofolate Reduct Complexed With Nadph And 2,4-Diamino-5-(3-(3,4,5-Trimethoxy Prop-1-Ynyl)-6-Ethylpyrimidine (Ucp120a)
authors A.C.Anderson, J.M.Beierlein, N.G.Karri
compound source
Molecule: Dihydrofolate Reductase
Chain: A, B
Ec: 1.5.1.3
Engineered: Yes
Mutation: Yes
Organism_scientific: Bacillus Anthracis
Organism_taxid: 1392
Gene: Bas2083, Ba_2237, Dfra, Gbaa2237, Gbaa_2237
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: M15
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe2
symmetry Space Group: P 42
R_factor 0.180 R_Free 0.208
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.241 78.241 66.790 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.25 Å
ligand EKB, NDP BindingDB enzyme Oxidoreductase E.C.1.5.1.3 BRENDA
Genes BA, GBAA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk]
  • Biological Unit Coordinates (3jvx.pdb1.gz) 63 Kb
  • Biological Unit Coordinates (3jvx.pdb2.gz) 63 Kb
  • LPC: Ligand-Protein Contacts for 3JVX
  • CSU: Contacts of Structural Units for 3JVX
  • Structure Factors (288 Kb)
  • Retrieve 3JVX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3JVX from S2C, [Save to disk]
  • Re-refined 3jvx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3JVX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3JVX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3JVX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3jvx] [3jvx_B] [3jvx_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3JVX
  • Community annotation for 3JVX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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