3JX7	Hydrolase Dna	date	Sep 18, 2009
title	Bacillus Cereus Alkylpurine Dna Glycosylase Alkd Bound To Dn Containing A 3-Methyladenine Analog
authors	E.H.Rubinson, B.F.Eichman
compound		source
Molecule: Alkylpurine Dna Glycosylase Alkd Chain: A Engineered: Yes		Organism_scientific: Bacillus Cereus Organism_taxid: 222523 Strain: Atcc 10987 Gene: Alkd, Bc_4913 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Hms174 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pbg103
Molecule: Dna (5'-D(Cpgpgpapcptp(Dzm)Papcpgpgpg Chain: B Engineered: Yes		Synthetic: Yes
Molecule: Dna (5'-D(Cpcpcpgptptpapgptpcpcpg)-3' Chain: C Engineered: Yes		Synthetic: Yes
symmetry	Space Group: P 1 21 1	R_factor 0.159 R_Free 0.183
crystal cell	length a length b length c angle alpha angle beta angle gamma 37.759 92.966 47.767 90.00 113.01 90.00
method	X-Ray Diffraction	resolution	1.60 Å
ligand	DZM	enzyme
Gene	BC
Primary reference	An unprecedented nucleic acid capture mechanism for excision of DNA damage., Rubinson EH, Gowda AS, Spratt TE, Gold B, Eichman BF, Nature. 2010 Nov 18;468(7322):406-11. Epub 2010 Oct 3. PMID:20927102

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk] Biological Unit Coordinates (3jx7.pdb1.gz) 113 Kb LPC: Ligand-Protein Contacts for 3JX7 CSU: Contacts of Structural Units for 3JX7 Structure Factors (570 Kb) Retrieve 3JX7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3JX7 from S2C, [Save to disk] Re-refined 3jx7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3JX7 in 3D

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Visual 3D analysis of 3JX7

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3JX7, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3jx7] [3jx7_C] [3jx7_A] [3jx7_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3JX7

Community annotation for 3JX7 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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