3KE0 Hydrolase date Oct 23, 2009
title Crystal Structure Of N370s Glucocerebrosidase At Acidic Ph.
authors R.R.Wei, S.Boucher, C.Q.Pan, T.Edmunds
compound source
Molecule: Glucosylceramidase
Chain: A, B
Synonym: Beta-Glucocerebrosidase, Acid Beta-Glucosidase, D- N-Acylsphingosine Glucohydrolase, Alglucerase, Imiglucerase
Ec: 3.2.1.45
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gba, Gc, Gluc
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: C 2 2 21
R_factor 0.172 R_Free 0.229
crystal
cell
length a length b length c angle alpha angle beta angle gamma
109.465 285.064 92.225 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand GOL, NAG, NDG, SO4 enzyme Hydrolase E.C.3.2.1.45 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • negative regulation of inter...

  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (173 Kb) [Save to disk]
  • Biological Unit Coordinates (3ke0.pdb1.gz) 166 Kb
  • Biological Unit Coordinates (3ke0.pdb2.gz) 167 Kb
  • Biological Unit Coordinates (3ke0.pdb3.gz) 330 Kb
  • LPC: Ligand-Protein Contacts for 3KE0
  • CSU: Contacts of Structural Units for 3KE0
  • Structure Factors (661 Kb)
  • Retrieve 3KE0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3KE0 from S2C, [Save to disk]
  • Re-refined 3ke0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3KE0 in 3D
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  • Visual 3D analysis of 3KE0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3KE0, from MSDmotif at EBI
  • Fold representative 3ke0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ke0_B] [3ke0_A] [3ke0]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3KE0
  • Community annotation for 3KE0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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