3KGD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	AMP, GOL, NA, SO4	enzyme
Gene	YP
Gene Ontology	Chain Function Process Component B, C, A, D
Primary reference	Structure of the RNA 3'-phosphate cyclase-adenylate intermediate illuminates nucleotide specificity and covalent nucleotidyl transfer., Tanaka N, Smith P, Shuman S, Structure. 2010 Mar 14;18(4):449-57. PMID:20399182

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (478 Kb) [Save to disk] Biological Unit Coordinates (3kgd.pdb1.gz) 118 Kb Biological Unit Coordinates (3kgd.pdb2.gz) 120 Kb Biological Unit Coordinates (3kgd.pdb3.gz) 117 Kb Biological Unit Coordinates (3kgd.pdb4.gz) 119 Kb LPC: Ligand-Protein Contacts for 3KGD CSU: Contacts of Structural Units for 3KGD Structure Factors (1464 Kb) Retrieve 3KGD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3KGD from S2C, [Save to disk] Re-refined 3kgd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3KGD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3kgd] [3kgd_A] [3kgd_B] [3kgd_C] [3kgd_D] SWISS-PROT database:

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