OCA Atlas for 3KH3

3KH3

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CU, SO4, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
D, J, F, C, E, G, L, K, I, A, B, H	superoxide dismutase activit... protein binding	anterograde axonal transport... retrograde axonal transport

Primary reference

Purification and crystallization of human Cu/Zn superoxide dismutase recombinantly produced in the protozoan Leishmania tarentolae., Gazdag EM, Cirstea IC, Breitling R, Lukes J, Blankenfeldt W, Alexandrov K, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Aug 1;66(Pt, 8):871-7. Epub 2010 Jul 27. PMID:20693657

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (570 Kb) [Save to disk]

Biological Unit Coordinates (3kh3.pdb1.gz) 96 Kb

Biological Unit Coordinates (3kh3.pdb2.gz) 99 Kb

Biological Unit Coordinates (3kh3.pdb3.gz) 98 Kb

Biological Unit Coordinates (3kh3.pdb4.gz) 98 Kb

Biological Unit Coordinates (3kh3.pdb5.gz) 97 Kb

Biological Unit Coordinates (3kh3.pdb6.gz) 98 Kb

LPC: Ligand-Protein Contacts for 3KH3

CSU: Contacts of Structural Units for 3KH3

Structure Factors (238 Kb)

Retrieve 3KH3 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3KH3 from S2C, [Save to disk]

Re-refined 3kh3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3KH3 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3kh3] [3kh3_A] [3kh3_B] [3kh3_C] [3kh3_D] [3kh3_E] [3kh3_F] [3kh3_G] [3kh3_H] [3kh3_I] [3kh3_J] [3kh3_K] [3kh3_L]

SWISS-PROT database:

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