3KJ1	Apoptosis	date	Nov 02, 2009
title	Mcl-1 In Complex With Bim Bh3 Mutant I2da
authors	E.Fire, R.A.Grant, A.E.Keating
compound		source
Molecule: Induced Myeloid Leukemia Cell Differentiation Pro 1; Chain: A Fragment: (Unp 172-322) Synonym: Bcl-2-Related Protein Eatmcl1, Mcl1eat, Bcl-2-Li 3, Bcl2-L-3; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Bcl2l3, Mcl-1, Mcl1 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Psv282
Molecule: Bcl-2-Like Protein 11 Chain: B Fragment: Bh3 Region Of Bim (Unp 1-21) Synonym: Bcl2-L-11, Bcl2-Interacting Mediator Of Cell Death Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Bcl2l11, Bim Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Psv282
symmetry	Space Group: I 2 2 2	R_factor 0.187 R_Free 0.213
crystal cell	length a length b length c angle alpha angle beta angle gamma 53.066 72.007 117.845 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.95 Å
ligand	ACT, CL, ZN	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Mcl-1-Bim complexes accommodate surprising point mutations via minor structural changes., Fire E, Gulla SV, Grant RA, Keating AE, Protein Sci. 2010 Jan 11. PMID:20066663

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk] Biological Unit Coordinates (3kj1.pdb1.gz) 63 Kb Biological Unit Coordinates (3kj1.pdb2.gz) 249 Kb LPC: Ligand-Protein Contacts for 3KJ1 CSU: Contacts of Structural Units for 3KJ1 Structure Factors (201 Kb) Retrieve 3KJ1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3KJ1 from S2C, [Save to disk] Re-refined 3kj1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3KJ1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3KJ1

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3KJ1, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3kj1] [3kj1_A] [3kj1_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3KJ1: [BCL ] by SMART

Other resources with information on 3KJ1

Community annotation for 3KJ1 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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