3KM4	Hydrolase Hydrolase Inhibitor	date	Nov 09, 2009
title	Optimization Of Orally Bioavailable Alkyl Amine Renin Inhibi
authors	Z.Wu, B.M.Mckeever
compound		source
Molecule: Renin Chain: A, B Synonym: Angiotensinogenase Ec: 3.4.23.15 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Human_renin, Ren Expression_system: Homo Sapiens Expression_system_taxid: 9606 Expression_system_cell_line: Hek293 Cells Expression_system_vector_type: Plasmid Expression_system_plasmid: Pcdna3.1
symmetry	Space Group: P 21 21 21	R_factor 0.200 R_Free 0.261
crystal cell	length a length b length c angle alpha angle beta angle gamma 53.834 96.940 148.568 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	22X, NAG BindingDB	enzyme	Hydrolase E.C.3.4.23.15 BRENDA
Gene	HUMAN
Gene Ontology	Chain Function Process Component A, B
Primary reference	Optimization of orally bioavailable alkyl amine renin inhibitors., Xu Z, Cacatian S, Yuan J, Simpson RD, Jia L, Zhao W, Tice CM, Flaherty PT, Guo J, Ishchenko A, Singh SB, Wu Z, McKeever BM, Scott BB, Bukhtiyarov Y, Berbaum J, Mason J, Panemangalore R, Cappiello MG, Bentley R, Doe CP, Harrison RK, McGeehan GM, Dillard LW, Baldwin JJ, Claremon DA, Bioorg Med Chem Lett. 2009 Dec 1. PMID:19959358

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk] Biological Unit Coordinates (3km4.pdb1.gz) 115 Kb LPC: Ligand-Protein Contacts for 3KM4 CSU: Contacts of Structural Units for 3KM4 Structure Factors (944 Kb) Retrieve 3KM4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3KM4 from S2C, [Save to disk] Re-refined 3km4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3KM4 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3KM4

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3KM4, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3km4_B] [3km4_A] [3km4] SWISS-PROT database: [P00797] Domain organization of [RENI_HUMAN] by SWISSPFAM

Other resources with information on 3KM4

Community annotation for 3KM4 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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