OCA Atlas for 3KR5

3KR5

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

1PE, BEY, CO3, SO4, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
K, D, I, H, G, B, E, L, F, C, J, A

Primary reference

Structure of the Plasmodium falciparum M17 aminopeptidase and significance for the design of drugs targeting the neutral exopeptidases., McGowan S, Oellig CA, Birru WA, Caradoc-Davies TT, Stack CM, Lowther J, Skinner-Adams T, Mucha A, Kafarski P, Grembecka J, Trenholme KR, Buckle AM, Gardiner DL, Dalton JP, Whisstock JC, Proc Natl Acad Sci U S A. 2010 Feb 9;107(6):2449-54. Epub 2010 Jan 21. PMID:20133789

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1934 Kb) [Save to disk]

Biological Unit Coordinates (3kr5.pdb1.gz) 958 Kb

Biological Unit Coordinates (3kr5.pdb2.gz) 971 Kb

LPC: Ligand-Protein Contacts for 3KR5

CSU: Contacts of Structural Units for 3KR5

Structure Factors (12004 Kb)

Retrieve 3KR5 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3KR5 from S2C, [Save to disk]

Re-refined 3kr5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3KR5 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3kr5] [3kr5_A] [3kr5_B] [3kr5_C] [3kr5_D] [3kr5_E] [3kr5_F] [3kr5_G] [3kr5_H] [3kr5_I] [3kr5_J] [3kr5_K] [3kr5_L]

SWISS-PROT database: [Q8IL11]

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