3KVW	Transferase	date	Nov 30, 2009
title	Crystal Structure Of Dual-Specificity Tyrosine Phosphorylati Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Lig
authors	P.Filippakopoulos, V.Myrianthopoulos, M.Kritsanida, P.Magiatis, A.L.Skaltsounis, M.Soundararajan, T.Krojer, O.Gileadi, E.Hapka, O.Fedorov, G.Berridge, J.Wang, L.Shrestha, M.Vollmar, F.Von Delf C.H.Arrowsmith, A.Edwards, J.Weigelt, C.Bountra, E.Mikros, S.Kna Structural Genomics Consortium (Sgc)
compound		source
Molecule: Dual Specificity Tyrosine-Phosphorylation-Regulat 2; Chain: A Fragment: Unp Residues 146-552 Synonym: Dyrk2 Ec: 2.7.12.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dyrk2 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)-R3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic28-Bsa4
symmetry	Space Group: P 42 21 2	R_factor 0.209 R_Free 0.260
crystal cell	length a length b length c angle alpha angle beta angle gamma 84.280 84.280 149.120 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.28 Å
ligand	CL, IRB, PTR, SEP BindingDB	enzyme	Transferase E.C.2.7.12.1 BRENDA
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk] Biological Unit Coordinates (3kvw.pdb1.gz) 68 Kb LPC: Ligand-Protein Contacts for 3KVW CSU: Contacts of Structural Units for 3KVW Structure Factors (385 Kb) Retrieve 3KVW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3KVW from S2C, [Save to disk] Re-refined 3kvw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3KVW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3KVW

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3KVW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3kvw_A] [3kvw] SWISS-PROT database: [Q92630] Domain organization of [DYRK2_HUMAN] by SWISSPFAM Domain found in 3KVW: [S_TKc ] by SMART

Other resources with information on 3KVW

Community annotation for 3KVW at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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