3KWJ Hydrolase date Dec 01, 2009
title Structure Of Human Dpp-Iv With (2s,3s,11bs)-3-(3-Fluoromethy 9,10-Dimethoxy-1,3,4,6,7,11b-Hexahydro-2h-Pyrido[2,1-A]Isoq Ylamine
authors M.Hennig, M.Stihle, R.Thoma
compound source
Molecule: Dipeptidyl Peptidase 4 Soluble Form
Chain: A, B
Synonym: Dipeptidyl Peptidase Iv, Dpp Iv, T-Cell Activation Cd26, Tp103, Adenosine Deaminase Complexing Protein 2, Adab
Ec: 3.4.14.5
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Pichia Pastoris
Expression_system_taxid: 4922
symmetry Space Group: P 21 21 21
R_factor 0.232 R_Free 0.276
crystal
cell
length a length b length c angle alpha angle beta angle gamma
65.199 68.957 421.562 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand 23Q, NAG enzyme Hydrolase E.C.3.4.14.5 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • virus receptor activity
  • chemorepellent activity


    • Primary referenceAryl- and heteroaryl-substituted aminobenzo[a]quinolizines as dipeptidyl peptidase IV inhibitors., Boehringer M, Fischer H, Hennig M, Hunziker D, Huwyler J, Kuhn B, Loeffler BM, Luebbers T, Mattei P, Narquizian R, Sebokova E, Sprecher U, Wessel HP, Bioorg Med Chem Lett. 2010 Feb 1;20(3):1106-8. Epub 2009 Dec 6. PMID:20031408
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (247 Kb) [Save to disk]
  • Biological Unit Coordinates (3kwj.pdb1.gz) 236 Kb
  • LPC: Ligand-Protein Contacts for 3KWJ
  • CSU: Contacts of Structural Units for 3KWJ
  • Structure Factors (852 Kb)
  • Retrieve 3KWJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3KWJ from S2C, [Save to disk]
  • Re-refined 3kwj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Proteopedia, because life has more than 2D.
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    • Visual 3D analysis of 3KWJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3KWJ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3kwj] [3kwj_B] [3kwj_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3KWJ
  • Community annotation for 3KWJ at PDBWiki (http://pdbwiki.org)
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