OCA Atlas for 3KXP

3KXP

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CL, MSE

enzyme

Gene
Ontology

Chain	Function	Process	Component
A, L, E, J, B, G, D, I, H, F, K, C

Primary reference

Structure Determination and Characterization of the Vitamin B(6) Degradative Enzyme (E)-2-(Acetamidomethylene)succinate Hydrolase (,)., McCulloch KM, Mukherjee T, Begley TP, Ealick SE, Biochemistry. 2010 Feb 16;49(6):1226-35. PMID:20099871

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (516 Kb) [Save to disk]

Biological Unit Coordinates (3kxp.pdb1.gz) 90 Kb

Biological Unit Coordinates (3kxp.pdb2.gz) 90 Kb

Biological Unit Coordinates (3kxp.pdb3.gz) 90 Kb

Biological Unit Coordinates (3kxp.pdb4.gz) 89 Kb

Biological Unit Coordinates (3kxp.pdb5.gz) 89 Kb

Biological Unit Coordinates (3kxp.pdb6.gz) 90 Kb

LPC: Ligand-Protein Contacts for 3KXP

CSU: Contacts of Structural Units for 3KXP

Structure Factors (4107 Kb)

Retrieve 3KXP in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3KXP from S2C, [Save to disk]

Re-refined 3kxp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3KXP in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3kxp] [3kxp_A] [3kxp_B] [3kxp_C] [3kxp_D] [3kxp_E] [3kxp_F] [3kxp_G] [3kxp_H] [3kxp_I] [3kxp_J] [3kxp_K] [3kxp_L]

SWISS-PROT database: [Q988D4]

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