3L15 Transcription date Dec 10, 2009
title Human Tead2 Transcriptional Factor
authors D.R.Tomchick, X.Luo, W.Tian
compound source
Molecule: Transcriptional Enhancer Factor Tef-4
Chain: A, B
Fragment: C-Terminal Residues 217-447
Synonym: Tea Domain Family Member 2, Tead-2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tead2, Tef4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
symmetry Space Group: C 1 2 1
R_factor 0.189 R_Free 0.245
crystal
cell
length a length b length c angle alpha angle beta angle gamma
121.144 61.567 80.472 90.00 117.27 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand GOL, MSE enzyme
Primary referenceStructural and functional analysis of the YAP-binding domain of human TEAD2., Tian W, Yu J, Tomchick DR, Pan D, Luo X, Proc Natl Acad Sci U S A. 2010 Apr 20;107(16):7293-8. Epub 2010 Apr 5. PMID:20368466
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (216 Kb) [Save to disk]
  • Biological Unit Coordinates (3l15.pdb1.gz) 102 Kb
  • Biological Unit Coordinates (3l15.pdb2.gz) 108 Kb
  • LPC: Ligand-Protein Contacts for 3L15
  • CSU: Contacts of Structural Units for 3L15
  • Structure Factors (202 Kb)
  • Retrieve 3L15 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3L15 from S2C, [Save to disk]
  • Re-refined 3l15 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3L15 in 3D
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3L15
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3L15, from MSDmotif at EBI
  • Fold representative 3l15 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3l15_B] [3l15] [3l15_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3L15
  • Community annotation for 3L15 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
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