3L19 Transferase date Dec 11, 2009
title Crystal Structure Of Calcium Binding Domain Of Cpcdpk3, Cgd5
authors W.Qiu, A.Hutchinson, A.Wernimont, J.R.Walker, H.Sullivan, Y.H.Li F.Mackenzie, I.Kozieradzki, D.Cossar, M.Schapira, G.Senisterra, C.H.Arrowsmith, C.Bountra, J.Weigelt, A.M.Edwards, A.Bochkarev, M.Amani, Structural Genomics Consortium (Sgc)
compound source
Molecule: Calciumcalmodulin Dependent Protein Kinase With Domain And 4 Calmodulin Like Ef Hands;
Chain: A, B
Ec: 2.7.1.-
Engineered: Yes
Organism_scientific: Cryptosporidium Parvum
Organism_taxid: 353152
Strain: Iowa II
Gene: Cgd5_820
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15-Mhl
symmetry Space Group: C 1 2 1
R_factor 0.215 R_Free 0.257
crystal
cell
length a length b length c angle alpha angle beta angle gamma
92.570 64.187 72.807 90.00 97.86 90.00
method X-Ray Diffractionresolution 2.14 Å
ligand 1PE, CA, GOL enzyme Transferase E.C.2.7.1 BRENDA
Gene CGD5
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (131 Kb) [Save to disk]
  • Biological Unit Coordinates (3l19.pdb1.gz) 126 Kb
  • Biological Unit Coordinates (3l19.pdb2.gz) 125 Kb
  • Biological Unit Coordinates (3l19.pdb3.gz) 64 Kb
  • Biological Unit Coordinates (3l19.pdb4.gz) 64 Kb
  • LPC: Ligand-Protein Contacts for 3L19
  • CSU: Contacts of Structural Units for 3L19
  • Structure Factors (470 Kb)
  • Retrieve 3L19 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3L19 from S2C, [Save to disk]
  • Re-refined 3l19 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3L19 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3L19
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3L19, from MSDmotif at EBI
  • Fold representative 3l19 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3l19_A] [3l19] [3l19_B]
  • SWISS-PROT database: [Q5CS01]
  • Domain organization of [Q5CS01_CRYPV] by SWISSPFAM
  • Domain found in 3L19: [EFh ] by SMART
  • Other resources with information on 3L19
  • Community annotation for 3L19 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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