3LEX Immune System date Jan 15, 2010
title 2f5 Epitope Scaffold Elicited Anti-Hiv-1 Monoclonal Antibody Complex With Hiv-1 Gp41
authors G.Ofek, F.J.Guenaga, W.R.Schief, J.Skinner, D.Baker, R.Wyatt, P.D.
compound source
Molecule: 11f10 Antibody Heavy Chain
Chain: H, A
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Strain: Balbc
Cell_line: Myeloma Cell Line Fo
Cell: Hybridoma

Molecule: 11f10 Antibody Light Chain
Chain: L, B

Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Strain: Balbc
Cell_line: Myeloma Cell Line Fo
Cell: Hybridoma

Molecule: Envelope Glycoprotein Gp41
Chain: P, C
Engineered: Yes

Synthetic: Yes
Organism_scientific: Human Immunodeficiency Virus 1
Organism_taxid: 11676
Other_details: Hiv-1 Gp41 Peptide
symmetry Space Group: P 1
R_factor 0.165 R_Free 0.198
crystal
cell
length a length b length c angle alpha angle beta angle gamma
34.543 70.962 78.265 90.08 90.02 90.29
method X-Ray Diffractionresolution 1.97 Å
ligand NH2 enzyme
Primary referenceElicitation of structure-specific antibodies by epitope scaffolds., Ofek G, Guenaga FJ, Schief WR, Skinner J, Baker D, Wyatt R, Kwong PD, Proc Natl Acad Sci U S A. 2010 Oct 19;107(42):17880-7. Epub 2010 Sep 27. PMID:20876137
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (151 Kb) [Save to disk]
  • Biological Unit Coordinates (3lex.pdb1.gz) 74 Kb
  • Biological Unit Coordinates (3lex.pdb2.gz) 74 Kb
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  • Structure Factors (643 Kb)
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  • View one-letter amino acid or nucleotide sequence for each chain: [3lex] [3lex_B] [3lex_L] [3lex_H] [3lex_C] [3lex_P] [3lex_A]
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