3LIS Transcription date Jan 25, 2010
title Crystal Structure Of The Restriction-Modification Controller C.Csp231i (Monoclinic Form)
authors J.E.Mcgeehan, S.D.Streeter, S.J.Thresh, G.G.Kneale
compound source
Molecule: Csp231i C Protein
Chain: A, B
Engineered: Yes
Organism_scientific: Citrobacter Sp. Rfl231
Organism_taxid: 315237
Gene: Csp231ic
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Gold
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11a
symmetry Space Group: P 1 21 1
R_factor 0.207 R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.010 29.530 64.380 90.00 101.91 90.00
method X-Ray Diffractionresolution 2.00 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural Analysis of a Novel Class of R-M Controller Proteins: C.Csp231I from Citrobacter sp. RFL231., McGeehan JE, Streeter SD, Thresh SJ, Taylor JE, Shevtsov MB, Kneale GG, J Mol Biol. 2011 Mar 31. PMID:21440553
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (3lis.pdb1.gz) 33 Kb
  • CSU: Contacts of Structural Units for 3LIS
  • Structure Factors (177 Kb)
  • Retrieve 3LIS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3LIS from S2C, [Save to disk]
  • Re-refined 3lis structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3LIS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3LIS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3LIS, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3lis_B] [3lis_A] [3lis]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3LIS: [HTH_XRE ] by SMART
  • Other resources with information on 3LIS
  • Community annotation for 3LIS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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