3LNK Structure of BACE bound to SCH743813 date
authors Orth, P., Cumming, J.
compound source
symmetry
R_factor
R_Free 0.2153
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
ligand 74A, TLA BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referencePiperazine sulfonamide BACE1 inhibitors: Design, synthesis, and in vivo characterization., Cumming J, Babu S, Huang Y, Carrol C, Chen X, Favreau L, Greenlee W, Guo T, Kennedy M, Kuvelkar R, Le T, Li G, McHugh N, Orth P, Ozgur L, Parker E, Saionz K, Stamford A, Strickland C, Tadesse D, Voigt J, Zhang L, Zhang Q, Bioorg Med Chem Lett. 2010 Mar 12. PMID:20347593
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (149 Kb) [Save to disk]
  • Biological Unit Coordinates (3lnk.pdb1.gz) 74 Kb
  • Biological Unit Coordinates (3lnk.pdb2.gz) 73 Kb
  • LPC: Ligand-Protein Contacts for 3LNK
  • CSU: Contacts of Structural Units for 3LNK
  • Structure Factors (3248 Kb)
  • Retrieve 3LNK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3LNK from S2C, [Save to disk]
  • Re-refined 3lnk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3LNK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3LNK
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3LNK, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3lnk] [3lnk_A] [3lnk_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3LNK
  • Community annotation for 3LNK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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