3LPI Structure of BACE Bound to SCH745132 date
authors Strickland, C., Cumming, J.
compound source
symmetry
R_factor
R_Free 0.238
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.05
ligand TLA, Z74 BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referencePiperazine sulfonamide BACE1 inhibitors: Design, synthesis, and in vivo characterization., Cumming J, Babu S, Huang Y, Carrol C, Chen X, Favreau L, Greenlee W, Guo T, Kennedy M, Kuvelkar R, Le T, Li G, McHugh N, Orth P, Ozgur L, Parker E, Saionz K, Stamford A, Strickland C, Tadesse D, Voigt J, Zhang L, Zhang Q, Bioorg Med Chem Lett. 2010 Mar 12. PMID:20347593
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (150 Kb) [Save to disk]
  • Biological Unit Coordinates (3lpi.pdb1.gz) 144 Kb
  • Biological Unit Coordinates (3lpi.pdb2.gz) 75 Kb
  • Biological Unit Coordinates (3lpi.pdb3.gz) 74 Kb
  • LPC: Ligand-Protein Contacts for 3LPI
  • CSU: Contacts of Structural Units for 3LPI
  • Structure Factors (980 Kb)
  • Retrieve 3LPI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3LPI from S2C, [Save to disk]
  • Re-refined 3lpi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3LPI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3LPI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3LPI, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3lpi_A] [3lpi_B] [3lpi]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3LPI
  • Community annotation for 3LPI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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