3LSG Transcription Regulator date Feb 12, 2010
title The Crystal Structure Of The C-Terminal Domain Of The Two- Component Response Regulator Yesn From Fusobacterium Nucleatum Subsp. Nucleatum Atcc 25586
authors K.Tan, E.Rakowski, S.Clancy, A.Joachimiak, Midwest Center For Structural Genomics (Mcsg)
compound source
Molecule: Two-Component Response Regulator Yesn
Chain: A, B, C, D, E
Fragment: C-Terminal Domain Residues 154-261
Engineered: Yes
Organism_scientific: Fusobacterium Nucleatum
Organism_taxid: 76856
Strain: Atcc 25586
Gene: Fn0189
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Ppk1037
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg19b
symmetry Space Group: P 31 2 1
R_factor 0.185 R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
66.224 66.224 245.401 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.05 Å
ligand MSE, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, E, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (186 Kb) [Save to disk]
  • Biological Unit Coordinates (3lsg.pdb1.gz) 76 Kb
  • Biological Unit Coordinates (3lsg.pdb2.gz) 72 Kb
  • Biological Unit Coordinates (3lsg.pdb3.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 3LSG
  • CSU: Contacts of Structural Units for 3LSG
  • Structure Factors (1143 Kb)
  • Retrieve 3LSG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3LSG from S2C, [Save to disk]
  • Re-refined 3lsg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3LSG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3LSG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3LSG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3lsg] [3lsg_D] [3lsg_C] [3lsg_E] [3lsg_B] [3lsg_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3LSG: [HTH_ARAC ] by SMART
  • Other resources with information on 3LSG
  • Community annotation for 3LSG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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