3LVH Structural Protein date Feb 20, 2010
title Crystal Structure Of A Clathrin Heavy Chain And Clathrin Lig Complex
authors J.D.Wilbur, P.K.Hwang, J.A.Ybe, M.Lane, B.D.Sellers, M.P.Jacobson R.J.Fletterick, F.M.Brodsky
compound source
Molecule: Clathrin Heavy Chain 1
Chain: A, B, C
Fragment: Hub
Engineered: Yes
Organism_scientific: Bos Taurus
Organism_common: Bovine,Cow,Domestic Cattle,Domestic Cow
Organism_taxid: 9913
Gene: Cltc
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid

Molecule: Clathrin Light Chain B
Chain: D, E, F
Synonym: Lcb
Engineered: Yes

Organism_scientific: Bos Taurus
Organism_common: Bovine,Cow,Domestic Cattle,Domestic Cow
Organism_taxid: 9913
Gene: Cltb, Cltlb
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
symmetry Space Group: P 42 21 2
R_factor 0.473 R_Free 0.487
crystal
cell
length a length b length c angle alpha angle beta angle gamma
229.711 229.711 512.269 90.00 90.00 90.00
method X-Ray Diffractionresolution 9.00 Å
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


F, D, E


Primary referenceConformation switching of clathrin light chain regulates clathrin lattice assembly., Wilbur JD, Hwang PK, Ybe JA, Lane M, Sellers BD, Jacobson MP, Fletterick RJ, Brodsky FM, Dev Cell. 2010 May 18;18(5):841-8. PMID:20493816
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (279 Kb) [Save to disk]
  • Biological Unit Coordinates (3lvh.pdb1.gz) 269 Kb
  • CSU: Contacts of Structural Units for 3LVH
  • Structure Factors (248 Kb)
  • Retrieve 3LVH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3LVH from S2C, [Save to disk]
  • Re-refined 3lvh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3LVH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3LVH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3LVH, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3lvh_F] [3lvh_B] [3lvh_D] [3lvh_C] [3lvh] [3lvh_E] [3lvh_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3LVH: [CLH ] by SMART
  • Other resources with information on 3LVH
  • Community annotation for 3LVH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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