3LW1 Peptide Binding Protein date Feb 23, 2010
title Binary Complex Of 14-3-3 Sigma And P53 Pt387-Peptide
authors B.Schumacher, J.Mondry, P.Thiel, M.Weyand, C.Ottmann
compound source
Molecule: 14-3-3 Protein Sigma
Chain: A
Synonym: Stratifin, Epithelial Cell Marker Protein 1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hme1, Sfn
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pproex Htb

Molecule: Peptide Of Cellular Tumor Antigen P53
Chain: P
Fragment: Unp Residues 385-393
Synonym: Tumor Suppressor P53, Phosphoprotein P53, Antigen Ny-Co-13;
Engineered: Yes

Synthetic: Yes
Other_details: Synthetic Peptide, The Full Length Protein P53 Occurs In Homo Sapiens
symmetry Space Group: C 2 2 21
R_factor 0.126 R_Free 0.151
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.320 112.320 62.660 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.28 Å
ligand CL, CSO, GOL, MG, TPO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the p53 C-terminus bound to 14-3-3: Implications for stabilization of the p53 tetramer., Schumacher B, Mondry J, Thiel P, Weyand M, Ottmann C, FEBS Lett. 2010 Mar 3. PMID:20206173
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk]
  • Biological Unit Coordinates (3lw1.pdb1.gz) 207 Kb
  • LPC: Ligand-Protein Contacts for 3LW1
  • CSU: Contacts of Structural Units for 3LW1
  • Structure Factors (552 Kb)
  • Retrieve 3LW1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3LW1 from S2C, [Save to disk]
  • Re-refined 3lw1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3LW1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3LW1
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3LW1, from MSDmotif at EBI
  • Fold representative 3lw1 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3lw1] [3lw1_P] [3lw1_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3LW1: [14_3_3 ] by SMART
  • Other resources with information on 3LW1
  • Community annotation for 3LW1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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